Now showing items 1-10 of 10

    • Deep convolution neural network model to predict relapse in breast cancer 

      Jha, Alokkumar; Verma, Ghanshyam; Khan, Yasar; Mehmood, Qaiser; Rebholz-Schuhmann, Dietrich; Sahay, Ratnesh (IEEE, 2018-12-17)
      A mishap in anti-cancer drug distribution is critical in breast cancer patients due to poor prediction model to identify the treatment regime in ER+ve and ER-ve (Estrogen Receptor (ER)) patients. The traditional method for ...
    • Demonstrating a linked data platform for finite element biosimulations of cochlear mechanics 

      Mehdi, Muntazir; Khan, Yasar; Freitas, Andre; Jares, Joao; Hasapis, Panagiotis; Sahay, Ratnesh (CEUR-WS.org, 2015-10-11)
      Biosimulations employ Finite Element Method (FEM) to simulate complex biological systems in order to understand different aspects of human organs. The applications of FEM biosimulations range from human ear cochlear mechanics, ...
    • Demonstrating a linked data visualiser for finite element biosimulations 

      Mehdi, Muntazir; Khan, Yasar; Freitas, Andre; Jares, Joao; Raza, Saleem; Hasapis, Panagiotis; Sahay, Ratnesh (IEEE, 2016-02-04)
      Healthcare experts have recently turned towards the use of Biosimulation models to understand the multiple or different causative factors that cause impairment in human organs. The applications of biosimulations have been ...
    • Detecting inner-ear anatomical and clinical datasets in the linked open data (LOD) cloud 

      Mehdi, Muntazir; Iqbal, Aftab; Khan, Yasar; Decker, Stefan; Sahay, Ratnesh (CEUR-WS.org, 2015-10-15)
      Linked Open Data (LOD) Cloud is a mesh of open datasets coming from different domains. Among these datasets, a notable amount of datasets belong to the life sciences domain linked together forming an interlinked “Life ...
    • An evaluation of SPARQL federation engines over multiple endpoints 

      Saleem, Muhammad; Khan, Yasar; Hasnain, Ali; Ermilov, Ivan; Ngonga Ngomo, Axel-Cyrille (NUI Galway, 2018-04-23)
      Due to decentralized and linked architecture underlying Linking Data, running complex queries often require collecting data from multiple RDF datasets. The optimization of the runtime of such queries, called federated ...
    • Extending inner-ear anatomical concepts in the Foundational Model of Anatomy (FMA) ontology 

      Khan, Yasar; Mehdi, Muntazir; Jha, Alokkumar; Raza, Saleem; Freitas, Andre; Jones, Marggie; Sahay, Ratnesh (IEEE, 2015-11-02)
      The inner ear is physically inaccessible in living humans, which leads to unique difficulties in studying its normal function and pathology as in other human organs. Recently, biosimulation model has gained a significant ...
    • Linked data cased multi-omics integration and visualization for cancer decision networks 

      Jha, Alokkumar; Khan, Yasar; Mehmood, Qaiser; Rebholz-Schuhmann, Dietrich; Sahay, Ratnesh (Springer Verlag, 2018-12-30)
      Visualization of Gene Expression (GE) is a challenging task since the number of genes and their associations are difficult to predict in various set of biological studies. GE could be used to understand tissue-gene-protein ...
    • A linked data platform for finite element biosimulations 

      Mehdi, Muntazir; Khan, Yasar; Freitas, Andre; Jares, Joao; Decker, Stefan; Sahay, Ratnesh (ACM, 2015-09-16)
      Biosimulation models have been recently introduced to understand the exact causative factors that give rise to impairment in human organs. Finite Element Method (FEM) provides a mathematical framework to simulate dynamic ...
    • A linked data visualiser for finite element biosimulations 

      Mehdi, Muntazir; Khan, Yasar; Freitas, Andre; Jares, Joao; Raza, Saleem; Hasapis, Panagiotis; Sahay, Ratnesh (IEEE, 2016-02-04)
      Biosimulation models are used to understand the multiple or different causative factors that cause impairment in human organs. Finite Element Method (FEM) provide a mathematical framework to simulate dynamic biological ...
    • Linked functional annotation for differentially expressed gene (DEG) demonstrated using Illumina Body Map 2.0 

      Jha, Alokkumar; Khan, Yasar; Iqbal, Aftab; Zappa, Achille; Mehdi, Muntazir; Sahay, Ratnesh; Rebholz-Schuhmann, Dietrich (CEUR-WS.org, 2015-12-09)
      Semantic Web technologies are core for the integration of disparate data resources. It can be used to exploit data from next generation sequencing (NGS) for therapeutic decisions regarding cancer. In this manuscript, ...