Now showing items 1-8 of 8

    • Assessing FAIR data principles against the 5-Star open data principles 

      Hasnain, Ali; Rebholz-Schuhmann, Dietrich (Springer Verlag, 2018-08-02)
      Access to biomedical data is increasingly important to enable data driven science in the research community. The Linked Open Data (LOD) principles (by Tim Berner-Lee) have been suggested to judge the quality of data by its ...
    • Biomedical semantic resources for drug discovery platforms 

      Hasnain, Ali; Rebholz-Schuhmann, Dietrich (Springer Verlag, 2017-11-08)
      The biomedical research community is providing large-scale data sources to enable knowledge discovery from the data alone, or from novel scientific experiments in combination with the existing knowledge. Increasingly ...
    • Deep convolution neural network model to predict relapse in breast cancer 

      Jha, Alokkumar; Verma, Ghanshyam; Khan, Yasar; Mehmood, Qaiser; Rebholz-Schuhmann, Dietrich; Sahay, Ratnesh (IEEE, 2018-12-17)
      A mishap in anti-cancer drug distribution is critical in breast cancer patients due to poor prediction model to identify the treatment regime in ER+ve and ER-ve (Estrogen Receptor (ER)) patients. The traditional method for ...
    • A deep learning approach to genomics data for population scale clustering and ethnicity prediction 

      Karim, Md. Rezaul; Zappa, Achille; Sahay, Ratnesh; Rebholz-Schuhmann, Dietrich (CEUR-WS.org, 2017-05-28)
      The understanding of variations in genome sequences assists us in identifying people who are predisposed to common diseases, solving rare diseases, and finding corresponding population group of the individuals from a ...
    • Extending largeRDFBench for multi-source data at scale for SPARQL endpoint federation 

      Hasnain, Ali; Saleem, Muhammad; Ngomo, Axel-Cyrille Ngonga; Rebholz-Schuhmann, Dietrich (IOS Press, 2018)
      Querying the Web of Data is highly motivated by the use of federation approaches mainly SPARQL query federation when the data is available through endpoints. Different benchmarks have been proposed to exploit the full ...
    • Linked data cased multi-omics integration and visualization for cancer decision networks 

      Jha, Alokkumar; Khan, Yasar; Mehmood, Qaiser; Rebholz-Schuhmann, Dietrich; Sahay, Ratnesh (Springer Verlag, 2018-12-30)
      Visualization of Gene Expression (GE) is a challenging task since the number of genes and their associations are difficult to predict in various set of biological studies. GE could be used to understand tissue-gene-protein ...
    • Linked functional annotation for differentially expressed gene (DEG) demonstrated using Illumina Body Map 2.0 

      Jha, Alokkumar; Khan, Yasar; Iqbal, Aftab; Zappa, Achille; Mehdi, Muntazir; Sahay, Ratnesh; Rebholz-Schuhmann, Dietrich (CEUR-WS.org, 2015-12-09)
      Semantic Web technologies are core for the integration of disparate data resources. It can be used to exploit data from next generation sequencing (NGS) for therapeutic decisions regarding cancer. In this manuscript, ...
    • Querying web polystores 

      Khan, Ya; Zimmermann, Antoine; Jha, AlokKumar; Rebholz-Schuhmann, Dietrich; Sahay, Ratnesh (IEEE, 2017-12-11)
      The database, semantic web, and linked data communities have proposed solutions that federate queries over multiple data sources using a single data model. Nowadays, the data retrieval requirements originating from versatile ...